This is the complete list of members for DIAlign::AlignObj, including all inherited members.

AlignObj(int ROW_SIZE, int COL_SIZE)	DIAlign::AlignObj	inline
alterAlignScore	DIAlign::AlignObj
FreeEndGaps	DIAlign::AlignObj
GapExten	DIAlign::AlignObj
GapOpen	DIAlign::AlignObj
indexA_aligned	DIAlign::AlignObj
indexB_aligned	DIAlign::AlignObj
M	DIAlign::AlignObj
M_forw	DIAlign::AlignObj
nGaps	DIAlign::AlignObj
OptionalPaths	DIAlign::AlignObj
Path	DIAlign::AlignObj
s_data	DIAlign::AlignObj
score	DIAlign::AlignObj
score_forw	DIAlign::AlignObj
signalA_len	DIAlign::AlignObj
signalB_len	DIAlign::AlignObj
simPath	DIAlign::AlignObj
simScore_forw	DIAlign::AlignObj
Traceback	DIAlign::AlignObj
~AlignObj() (defined in DIAlign::AlignObj)	DIAlign::AlignObj	inline